3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
AGAG*CGAU
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_238 not in the Motif Atlas
Homologous match to IL_8C3A_141
Geometric discrepancy: 0.1276
The information below is about IL_8C3A_141
Detailed Annotation
Double sheared; A in syn
Broad Annotation
Double sheared
Motif group
IL_09705.12
Basepair signature
cWW-tSH-tHS-cWW
Number of instances in this motif group
35

Unit IDs

7ZUX|1|5|A|3343
7ZUX|1|5|G|3344
7ZUX|1|5|A|3345
7ZUX|1|5|G|3346
*
7ZUX|1|5|C|3361
7ZUX|1|5|G|3362
7ZUX|1|5|A|3363
7ZUX|1|5|U|3364

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain DI
40S ribosomal protein S8-B
Chain EQ
60S ribosomal protein L19-A
Chain EV
60S ribosomal protein L24-A

Coloring options:


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