IL_7ZW0_004

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GAUUAAG*CGC

Length

10 nucleotides

Bulged bases

7ZW0|1|2|A|47

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_004 not in the Motif Atlas

Geometric match to IL_4V88_387

Geometric discrepancy: 0.0711

The information below is about IL_4V88_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77761.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7ZW0|1|2|G|42
7ZW0|1|2|A|43
7ZW0|1|2|U|44
7ZW0|1|2|U|45
7ZW0|1|2|A|46
7ZW0|1|2|A|47
7ZW0|1|2|G|48
*
7ZW0|1|2|C|431
7ZW0|1|2|G|432
7ZW0|1|2|C|433

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sc

40S ribosomal protein S23-A