IL_7ZW0_007

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAUAAG*UGAAA

Length

11 nucleotides

Bulged bases

7ZW0|1|2|U|66, 7ZW0|1|2|A|68

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_007 not in the Motif Atlas

Geometric match to IL_4V88_390

Geometric discrepancy: 0.1056

The information below is about IL_4V88_390

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87517.1

Basepair signature

cWW-L-R-L-R-tHS-L-cWW

Number of instances in this motif group

2

Unit IDs

7ZW0|1|2|U|64
7ZW0|1|2|A|65
7ZW0|1|2|U|66
7ZW0|1|2|A|67
7ZW0|1|2|A|68
7ZW0|1|2|G|69
*
7ZW0|1|2|U|82
7ZW0|1|2|G|83
7ZW0|1|2|A|84
7ZW0|1|2|A|85
7ZW0|1|2|A|86

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain LZ

60S ribosomal protein L24-A

Chain sT

40S ribosomal protein S6-B

Chain sd

40S ribosomal protein S24-A