IL_7ZW0_011

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAUAAC*GCUAAUA

Length

13 nucleotides

Bulged bases

7ZW0|1|2|U|170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_011 not in the Motif Atlas

Geometric match to IL_4LFB_009

Geometric discrepancy: 0.2002

The information below is about IL_4LFB_009

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_00680.1

Basepair signature

cWW-L-R-tWH-L-R-L-cWW-cWW

Number of instances in this motif group

3

Unit IDs

7ZW0|1|2|U|144
7ZW0|1|2|A|145
7ZW0|1|2|U|146
7ZW0|1|2|A|147
7ZW0|1|2|A|148
7ZW0|1|2|C|149
*
7ZW0|1|2|G|165
7ZW0|1|2|C|166
7ZW0|1|2|U|167
7ZW0|1|2|A|168
7ZW0|1|2|A|169
7ZW0|1|2|U|170
7ZW0|1|2|A|171

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain LZ

60S ribosomal protein L24-A

Chain sT

40S ribosomal protein S6-B

Chain sd

40S ribosomal protein S24-A