IL_7ZW0_012

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGU*AGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_012 not in the Motif Atlas

Geometric match to IL_6RA4_002

Geometric discrepancy: 0.0972

The information below is about IL_6RA4_002

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.6

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

51

Unit IDs

7ZW0|1|2|U|150
7ZW0|1|2|G|151
7ZW0|1|2|U|152
*
7ZW0|1|2|A|162
7ZW0|1|2|G|163
7ZW0|1|2|A|164

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain LZ

60S ribosomal protein L24-A

Chain sT

40S ribosomal protein S6-B

Chain sd

40S ribosomal protein S24-A