IL_7ZW0_021

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGG*CGAUUC

Length

9 nucleotides

Bulged bases

7ZW0|1|2|U|380

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_021 not in the Motif Atlas

Geometric match to IL_4V88_404

Geometric discrepancy: 0.0566

The information below is about IL_4V88_404

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_11347.3

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

2

Unit IDs

7ZW0|1|2|G|363
7ZW0|1|2|G|364
7ZW0|1|2|G|365
*
7ZW0|1|2|C|376
7ZW0|1|2|G|377
7ZW0|1|2|A|378
7ZW0|1|2|U|379
7ZW0|1|2|U|380
7ZW0|1|2|C|381

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sS

40S ribosomal protein S4-B

Chain sW

40S ribosomal protein S9-A

Chain sc

40S ribosomal protein S23-A