IL_7ZW0_060

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GG*CAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_060 not in the Motif Atlas

Geometric match to IL_4LFB_038

Geometric discrepancy: 0.1342

The information below is about IL_4LFB_038

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

61

Unit IDs

7ZW0|1|2|G|1178
7ZW0|1|2|G|1179
*
7ZW0|1|2|C|1459
7ZW0|1|2|A|1460
7ZW0|1|2|C|1461

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sE

RPS15 isoform 1

Chain sH

40S ribosomal protein S18-A

Chain sl

Transfer RNA; tRNA

Chain sn

Transfer RNA; tRNA