IL_7ZW0_064

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

ACA*UUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_064 not in the Motif Atlas

Geometric match to IL_4V88_448

Geometric discrepancy: 0.18

The information below is about IL_4V88_448

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_30342.2

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

10

Unit IDs

7ZW0|1|2|A|1234
7ZW0|1|2|C|1235
7ZW0|1|2|A|1236
*
7ZW0|1|2|U|1249
7ZW0|1|2|U|1250
7ZW0|1|2|U|1251

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sE

RPS15 isoform 1

Chain sM

RPS29A isoform 1

Chain sN

40S ribosomal protein S31