IL_7ZW0_079

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7ZW0|1|2|C|1637, 7ZW0|1|2|A|1766

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_079 not in the Motif Atlas

Geometric match to IL_4V88_463

Geometric discrepancy: 0.079

The information below is about IL_4V88_463

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

7ZW0|1|2|C|1636
7ZW0|1|2|C|1637
7ZW0|1|2|G|1638
*
7ZW0|1|2|C|1764
7ZW0|1|2|A|1765
7ZW0|1|2|A|1766
7ZW0|1|2|G|1767

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain se

40S ribosomal protein S26-A

Chain sm

mRNA

Chain sn

Transfer RNA; tRNA