IL_7ZW0_122

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_122 not in the Motif Atlas

Homologous match to IL_8C3A_033

Geometric discrepancy: 0.0664

The information below is about IL_8C3A_033

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_95716.2

Basepair signature

cWW-cWW-tHS-tHS-tSH-cWW

Number of instances in this motif group

18

Unit IDs

7ZW0|1|LA|U|834
7ZW0|1|LA|G|835
7ZW0|1|LA|A|836
7ZW0|1|LA|A|837
7ZW0|1|LA|G|838
*
7ZW0|1|LA|U|855
7ZW0|1|LA|G|856
7ZW0|1|LA|G|857
7ZW0|1|LA|A|858
7ZW0|1|LA|G|859

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LE

60S ribosomal protein L2-A

Chain LU

60S ribosomal protein L19-A

Chain Ls

60S ribosomal protein L43-A