IL_7ZW0_135

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUCCG*UGA

Length

8 nucleotides

Bulged bases

7ZW0|1|LA|C|1016, 7ZW0|1|LA|C|1017

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_135 not in the Motif Atlas

Geometric match to IL_3C3Z_002

Geometric discrepancy: 0.1968

The information below is about IL_3C3Z_002

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_53541.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

7ZW0|1|LA|U|1014
7ZW0|1|LA|U|1015
7ZW0|1|LA|C|1016
7ZW0|1|LA|C|1017
7ZW0|1|LA|G|1018
*
7ZW0|1|LA|U|1034
7ZW0|1|LA|G|1035
7ZW0|1|LA|A|1036

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LM

60S ribosomal protein L10

Chain LN

60S ribosomal protein L11-A

Chain sl

Transfer RNA; tRNA