IL_7ZW0_143

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GACACCACAAAA*UGAAAAUGGAUGGCGC

Length

28 nucleotides

Bulged bases

7ZW0|1|LA|C|1196, 7ZW0|1|LA|A|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_143 not in the Motif Atlas

Geometric match to IL_5TBW_052

Geometric discrepancy: 0.0489

The information below is about IL_5TBW_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_53762.1

Basepair signature

cWW-tSH-tHH-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

7ZW0|1|LA|G|1194
7ZW0|1|LA|A|1195
7ZW0|1|LA|C|1196
7ZW0|1|LA|A|1197
7ZW0|1|LA|C|1198
7ZW0|1|LA|C|1199
7ZW0|1|LA|A|1200
7ZW0|1|LA|C|1201
7ZW0|1|LA|A|1202
7ZW0|1|LA|A|1203
7ZW0|1|LA|A|1204
7ZW0|1|LA|A|1205
*
7ZW0|1|LA|U|1299
7ZW0|1|LA|G|1300
7ZW0|1|LA|A|1301
7ZW0|1|LA|A|1302
7ZW0|1|LA|A|1303
7ZW0|1|LA|A|1304
7ZW0|1|LA|U|1305
7ZW0|1|LA|G|1306
7ZW0|1|LA|G|1307
7ZW0|1|LA|A|1308
7ZW0|1|LA|U|1309
7ZW0|1|LA|G|1310
7ZW0|1|LA|G|1311
7ZW0|1|LA|C|1312
7ZW0|1|LA|G|1313
7ZW0|1|LA|C|1314

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LC

5S ribosomal RNA; 5S rRNA

Chain LF

60S ribosomal protein L3

Chain LJ

60S ribosomal protein L7-A

Chain LM

60S ribosomal protein L10

Chain LR

60S ribosomal protein L16-A

Chain Li

60S ribosomal protein L33-A

Chain Lp

60S ribosomal protein L40-A