IL_7ZW0_156

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GAUA*UGC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_156 not in the Motif Atlas

Homologous match to IL_8C3A_070

Geometric discrepancy: 0.0716

The information below is about IL_8C3A_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15698.1

Basepair signature

cWW-tSH-cSH-cWW

Number of instances in this motif group

9

Unit IDs

7ZW0|1|LA|G|1618
7ZW0|1|LA|A|1619
7ZW0|1|LA|U|1620
7ZW0|1|LA|A|1621
*
7ZW0|1|LA|U|1824
7ZW0|1|LA|G|1825
7ZW0|1|LA|C|1826

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LD

5.8S ribosomal RNA; 5.8S rRNA

Chain Ln

60S ribosomal protein L38

Chain Lt

60S ribosomal protein L41-A