IL_7ZW0_158

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UCUUC*GGAAUA

Length

11 nucleotides

Bulged bases

7ZW0|1|LA|U|1629

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_158 not in the Motif Atlas

Geometric match to IL_5TBW_066

Geometric discrepancy: 0.1064

The information below is about IL_5TBW_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48431.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7ZW0|1|LA|U|1627
7ZW0|1|LA|C|1628
7ZW0|1|LA|U|1629
7ZW0|1|LA|U|1630
7ZW0|1|LA|C|1631
*
7ZW0|1|LA|G|1811
7ZW0|1|LA|G|1812
7ZW0|1|LA|A|1813
7ZW0|1|LA|A|1814
7ZW0|1|LA|U|1815
7ZW0|1|LA|A|1816

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain Lc

60S ribosomal protein L27-A

Chain Lt

60S ribosomal protein L41-A