IL_7ZW0_163

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUAAC*GGAAGA

Length

11 nucleotides

Bulged bases

7ZW0|1|LA|G|1751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_163 not in the Motif Atlas

Homologous match to IL_8C3A_077

Geometric discrepancy: 0.0562

The information below is about IL_8C3A_077

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69313.1

Basepair signature

cWW-tWH-tHH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

7ZW0|1|LA|U|1694
7ZW0|1|LA|U|1695
7ZW0|1|LA|A|1696
7ZW0|1|LA|A|1697
7ZW0|1|LA|C|1698
*
7ZW0|1|LA|G|1747
7ZW0|1|LA|G|1748
7ZW0|1|LA|A|1749
7ZW0|1|LA|A|1750
7ZW0|1|LA|G|1751
7ZW0|1|LA|A|1752

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain Lj

60S ribosomal protein L34-A

Chain Ln

60S ribosomal protein L38