3D structure

PDB id
7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
FAP-80S Complex - Rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CGGAAUU*GGAGAUG
Length
14 nucleotides
Bulged bases
7ZW0|1|LA|U|1716, 7ZW0|1|LA|A|1729
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZW0_165 not in the Motif Atlas
Homologous match to IL_8C3A_079
Geometric discrepancy: 0.1277
The information below is about IL_8C3A_079
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_60192.2
Basepair signature
cWW-tSH-tSH-tSS-tHS-L-R-cWW
Number of instances in this motif group
3

Unit IDs

7ZW0|1|LA|C|1711
7ZW0|1|LA|G|1712
7ZW0|1|LA|G|1713
7ZW0|1|LA|A|1714
7ZW0|1|LA|A|1715
7ZW0|1|LA|U|1716
7ZW0|1|LA|U|1717
*
7ZW0|1|LA|G|1727
7ZW0|1|LA|G|1728
7ZW0|1|LA|A|1729
7ZW0|1|LA|G|1730
7ZW0|1|LA|A|1731
7ZW0|1|LA|U|1732
7ZW0|1|LA|G|1733

Current chains

Chain LA
25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LU
60S ribosomal protein L19-A
Chain Lc
60S ribosomal protein L27-A
Chain Lf
60S ribosomal protein L30
Chain Ls
60S ribosomal protein L43-A
Chain sY
40S ribosomal protein S13

Coloring options:


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