IL_7ZW0_169

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AGUCGG*CUGU

Length

10 nucleotides

Bulged bases

7ZW0|1|LA|G|2335

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_169 not in the Motif Atlas

Geometric match to IL_5TBW_077

Geometric discrepancy: 0.0764

The information below is about IL_5TBW_077

Detailed Annotation

Intercalated tWH

Broad Annotation

Intercalated tWH

Motif group

IL_06455.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

7

Unit IDs

7ZW0|1|LA|A|1901
7ZW0|1|LA|G|1902
7ZW0|1|LA|U|1903
7ZW0|1|LA|C|1904
7ZW0|1|LA|G|1905
7ZW0|1|LA|G|1906
*
7ZW0|1|LA|C|2333
7ZW0|1|LA|U|2334
7ZW0|1|LA|G|2335
7ZW0|1|LA|U|2336

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LF

60S ribosomal protein L3

Chain LY

60S ribosomal protein L23-A