IL_7ZW0_212

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AUUAU*AGAAU

Length

10 nucleotides

Bulged bases

7ZW0|1|LA|A|3130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_212 not in the Motif Atlas

Homologous match to IL_8C3A_129

Geometric discrepancy: 0.0645

The information below is about IL_8C3A_129

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.4

Basepair signature

cWW-tWH-cWW-L-cWW-tHS

Number of instances in this motif group

15

Unit IDs

7ZW0|1|LA|A|3103
7ZW0|1|LA|U|3104
7ZW0|1|LA|U|3105
7ZW0|1|LA|A|3106
7ZW0|1|LA|U|3107
*
7ZW0|1|LA|A|3127
7ZW0|1|LA|G|3128
7ZW0|1|LA|A|3129
7ZW0|1|LA|A|3130
7ZW0|1|LA|U|3131

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LL

60S ribosomal protein L9-A

Chain LR

60S ribosomal protein L16-A

Chain Lp

60S ribosomal protein L40-A