IL_7ZW0_225

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGUAAG*CUGAG

Length

11 nucleotides

Bulged bases

7ZW0|1|LA|G|3369

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_225 not in the Motif Atlas

Homologous match to IL_8C3A_139

Geometric discrepancy: 0.055

The information below is about IL_8C3A_139

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83162.8

Basepair signature

cWW-cWW-tSH-cWW-tHH-L

Number of instances in this motif group

4

Unit IDs

7ZW0|1|LA|U|3332
7ZW0|1|LA|G|3333
7ZW0|1|LA|U|3334
7ZW0|1|LA|A|3335
7ZW0|1|LA|A|3336
7ZW0|1|LA|G|3337
*
7ZW0|1|LA|C|3367
7ZW0|1|LA|U|3368
7ZW0|1|LA|G|3369
7ZW0|1|LA|A|3370
7ZW0|1|LA|G|3371

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LF

60S ribosomal protein L3

Chain LZ

60S ribosomal protein L24-A

Chain Lg

60S ribosomal protein L31-A