IL_7ZW0_228

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CC*GUUG

Length

6 nucleotides

Bulged bases

7ZW0|1|LA|U|3354, 7ZW0|1|LA|U|3355

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_228 not in the Motif Atlas

Geometric match to IL_5TBW_136

Geometric discrepancy: 0.2525

The information below is about IL_5TBW_136

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.1

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

7ZW0|1|LA|C|3349
7ZW0|1|LA|C|3350
*
7ZW0|1|LA|G|3353
7ZW0|1|LA|U|3354
7ZW0|1|LA|U|3355
7ZW0|1|LA|G|3356

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain sV

40S ribosomal protein S8-A