IL_7ZW0_240

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUG*CUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_240 not in the Motif Atlas

Geometric match to IL_4E59_001

Geometric discrepancy: 0.1456

The information below is about IL_4E59_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

7ZW0|1|sn|G|5
7ZW0|1|sn|U|6
7ZW0|1|sn|G|7
*
7ZW0|1|sn|C|66
7ZW0|1|sn|U|67
7ZW0|1|sn|C|68

Current chains

Chain sn

tRNA

Nearby chains

Chain LA

Large subunit ribosomal RNA; LSU rRNA

Chain Lr

60S ribosomal protein L42-A