IL_8A3L_123

3D structure

PDB id

8A3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into the binding of bS1 to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.42 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

8A3L|1|a|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8A3L_123 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.1375

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

8A3L|1|a|C|1417
8A3L|1|a|G|1418
8A3L|1|a|A|1419
8A3L|1|a|A|1420
8A3L|1|a|G|1421
*
8A3L|1|a|C|1577
8A3L|1|a|U|1578
8A3L|1|a|A|1579
8A3L|1|a|A|1580
8A3L|1|a|G|1581

Current chains

Chain a

23S ribosomal RNA

Nearby chains