IL_8A5I_010

3D structure

PDB id

8A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GUUACAAAAG*CCC

Length

13 nucleotides

Bulged bases

8A5I|1|A|U|320

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A5I|1|A|G|318
8A5I|1|A|U|319
8A5I|1|A|U|320
8A5I|1|A|A|321
8A5I|1|A|C|322
8A5I|1|A|A|323
8A5I|1|A|A|324
8A5I|1|A|A|325
8A5I|1|A|A|326
8A5I|1|A|G|327
*
8A5I|1|A|C|398
8A5I|1|A|C|399
8A5I|1|A|C|400

Current chains

Chain A

23S ribosomal RNA

Nearby chains