IL_8A5I_042

3D structure

PDB id

8A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GUUGGC*GCCACC

Length

12 nucleotides

Bulged bases

8A5I|1|A|U|1107

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A5I|1|A|G|1105
8A5I|1|A|U|1106
8A5I|1|A|U|1107
8A5I|1|A|G|1108
8A5I|1|A|G|1109
8A5I|1|A|C|1110
*
8A5I|1|A|G|1120
8A5I|1|A|C|1121
8A5I|1|A|C|1122
8A5I|1|A|A|1123
8A5I|1|A|C|1124
8A5I|1|A|C|1125

Current chains

Chain A

23S ribosomal RNA

Nearby chains