IL_8AGU_018
3D structure
- PDB id
- 8AGU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast RQC complex in state E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 8AGU|1|f|A|578
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8AGU_018 not in the Motif Atlas
- Homologous match to IL_5TBW_018
- Geometric discrepancy: 0.1261
- The information below is about IL_5TBW_018
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
8AGU|1|f|U|512
8AGU|1|f|G|513
*
8AGU|1|f|C|577
8AGU|1|f|A|578
8AGU|1|f|G|579
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain l
- BJ4_G0008850.mRNA.1.CDS.1
- Chain o
- 60S ribosomal protein L7-A
Coloring options: