IL_8AGU_047
3D structure
- PDB id
- 8AGU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast RQC complex in state E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUU*AGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8AGU_047 not in the Motif Atlas
- Homologous match to IL_8C3A_050
- Geometric discrepancy: 0.0649
- The information below is about IL_8C3A_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
8AGU|1|f|U|1123
8AGU|1|f|U|1124
8AGU|1|f|U|1125
*
8AGU|1|f|A|1133
8AGU|1|f|G|1134
8AGU|1|f|A|1135
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain G
- 60S ribosomal protein L21-A
- Chain O
- 60S ribosomal protein L29
- Chain h
- 5S ribosomal RNA; 5S rRNA
- Chain r
- 60S ribosomal protein L10
Coloring options: