IL_8ANY_077
3D structure
- PDB id
- 8ANY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GACCC*GC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ANY_077 not in the Motif Atlas
- Geometric match to IL_5J7L_036
- Geometric discrepancy: 0.2879
- The information below is about IL_5J7L_036
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
8ANY|1|AA|G|1062
8ANY|1|AA|A|1063
8ANY|1|AA|C|1064
8ANY|1|AA|C|1065
8ANY|1|AA|C|1066
*
8ANY|1|AA|G|1092
8ANY|1|AA|C|1093
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain AI
- 28S ribosomal protein S11, mitochondrial
- Chain AL
- 28S ribosomal protein S15, mitochondrial
- Chain AQ
- 28S ribosomal protein S21, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
Coloring options: