IL_8ANY_102

3D structure

PDB id

8ANY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GCU*AGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GCU,AGC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ANY_102 not in the Motif Atlas

Geometric match to IL_1NBS_006

Geometric discrepancy: 0.3527

The information below is about IL_1NBS_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

8ANY|1|Ay|G|27
8ANY|1|Ay|C|28
8ANY|1|Ay|U|29
*
8ANY|1|Ay|A|41
8ANY|1|Ay|G|42
8ANY|1|Ay|C|43

Current chains

Chain Ay

E/E-tRNA

Nearby chains

Chain A2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain AF

28S ribosomal protein S7, mitochondrial