IL_8B0X_024

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

G(PSU)GCCAG*CGGUAAUAC

Length

16 nucleotides

Bulged bases

8B0X|1|A|A|532, 8B0X|1|A|U|534, 8B0X|1|A|A|535

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52042.1

Basepair signature

cWW-cSW-tWH-L-R-L-R-tHS-cWW

Number of instances in this motif group

5

Unit IDs

8B0X|1|A|G|515
8B0X|1|A|PSU|516
8B0X|1|A|G|517
8B0X|1|A|C|518
8B0X|1|A|C|519
8B0X|1|A|A|520
8B0X|1|A|G|521
*
8B0X|1|A|C|528
8B0X|1|A|G|529
8B0X|1|A|G|530
8B0X|1|A|U|531
8B0X|1|A|A|532
8B0X|1|A|A|533
8B0X|1|A|U|534
8B0X|1|A|A|535
8B0X|1|A|C|536

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

30S ribosomal protein S3

Chain D

30S ribosomal protein S4

Chain L

30S ribosomal protein S12