3D structure

PDB id
8B0X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Translating 70S ribosome in the unrotated state (P and E, tRNAs)
Experimental method
ELECTRON MICROSCOPY
Resolution
1.55 Å

Loop

Sequence
GGGAAAC*GGAAGAUGUAACGGGGC
Length
24 nucleotides
Bulged bases
8B0X|1|a|A|1129, 8B0X|1|a|U|1132
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_50715.4
Basepair signature
cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
Number of instances in this motif group
4

Unit IDs

8B0X|1|a|G|1026
8B0X|1|a|G|1027
8B0X|1|a|G|1028
8B0X|1|a|A|1029
8B0X|1|a|A|1030
8B0X|1|a|A|1031
8B0X|1|a|C|1032
*
8B0X|1|a|G|1126
8B0X|1|a|G|1127
8B0X|1|a|A|1128
8B0X|1|a|A|1129
8B0X|1|a|G|1130
8B0X|1|a|A|1131
8B0X|1|a|U|1132
8B0X|1|a|G|1133
8B0X|1|a|U|1134
8B0X|1|a|A|1135
8B0X|1|a|A|1136
8B0X|1|a|C|1137
8B0X|1|a|G|1138
8B0X|1|a|G|1139
8B0X|1|a|G|1140
8B0X|1|a|G|1141
8B0X|1|a|C|1142

Current chains

Chain a
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L36
Chain d
50S ribosomal protein L3
Chain i
50S ribosomal protein L13
Chain l
50S ribosomal protein L16

Coloring options:

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