IL_8B0X_104
3D structure
- PDB id
- 8B0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translating 70S ribosome in the unrotated state (P and E, tRNAs)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.55 Å
Loop
- Sequence
- CCCAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 8B0X|1|a|A|1048
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8B0X_104 not in the Motif Atlas
- Homologous match to IL_5J7L_284
- Geometric discrepancy: 0.0968
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
8B0X|1|a|C|1045
8B0X|1|a|C|1046
8B0X|1|a|C|1047
8B0X|1|a|A|1048
8B0X|1|a|G|1049
8B0X|1|a|A|1050
8B0X|1|a|C|1051
8B0X|1|a|A|1052
8B0X|1|a|G|1053
*
8B0X|1|a|U|1110
8B0X|1|a|C|1111
8B0X|1|a|G|1112
8B0X|1|a|A|1113
8B0X|1|a|G|1114
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L36
- Chain g
- 50S ribosomal protein L6
Coloring options: