IL_8B0X_114

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

8B0X|1|a|A|1422

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8B0X_114 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.0646

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

8B0X|1|a|C|1419
8B0X|1|a|G|1420
8B0X|1|a|A|1421
8B0X|1|a|A|1422
8B0X|1|a|G|1423
*
8B0X|1|a|C|1579
8B0X|1|a|U|1580
8B0X|1|a|A|1581
8B0X|1|a|A|1582
8B0X|1|a|G|1583

Current chains

Chain a

23S rRNA

Nearby chains