IL_8B2L_022

3D structure

PDB id

8B2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGAUG*CCGAUC

Length

11 nucleotides

Bulged bases

8B2L|1|A3|U|454

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B2L|1|A3|G|451
8B2L|1|A3|G|452
8B2L|1|A3|A|453
8B2L|1|A3|U|454
8B2L|1|A3|G|455
*
8B2L|1|A3|C|479
8B2L|1|A3|C|480
8B2L|1|A3|G|481
8B2L|1|A3|A|482
8B2L|1|A3|U|483
8B2L|1|A3|C|484

Current chains

Chain A3

25S rRNA

Nearby chains

Chain N3

eL28 (60S ribosomal protein L28)