IL_8B2L_031

3D structure

PDB id

8B2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CAACG*CGUAAG

Length

11 nucleotides

Bulged bases

8B2L|1|A3|A|693, 8B2L|1|A3|A|711

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B2L|1|A3|C|691
8B2L|1|A3|A|692
8B2L|1|A3|A|693
8B2L|1|A3|C|694
8B2L|1|A3|G|695
*
8B2L|1|A3|C|708
8B2L|1|A3|G|709
8B2L|1|A3|U|710
8B2L|1|A3|A|711
8B2L|1|A3|A|712
8B2L|1|A3|G|713

Current chains

Chain A3

25S rRNA

Nearby chains

Chain D3

60S ribosomal protein L13

Chain F3

Ribosomal protein L15

Chain G3

60S ribosomal protein L18-2-like

Chain f3

uL15 (60S ribosomal protein L27a)

Chain s3

uL4 (60S ribosomal protein L4)