IL_8B2L_035

3D structure

PDB id

8B2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUUGAUC*GUGAAGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B2L|1|A3|C|767
8B2L|1|A3|U|768
8B2L|1|A3|U|769
8B2L|1|A3|G|770
8B2L|1|A3|A|771
8B2L|1|A3|U|772
8B2L|1|A3|C|773
*
8B2L|1|A3|G|778
8B2L|1|A3|U|779
8B2L|1|A3|G|780
8B2L|1|A3|A|781
8B2L|1|A3|A|782
8B2L|1|A3|G|783
8B2L|1|A3|G|784

Current chains

Chain A3

25S rRNA

Nearby chains

Chain D3

60S ribosomal protein L13

Chain O3

60S ribosomal protein L29

Chain Z3

60S ribosomal protein L44

Chain f3

uL15 (60S ribosomal protein L27a)