IL_8B2L_119

3D structure

PDB id

8B2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGGUAGUAUAA*UAC

Length

14 nucleotides

Bulged bases

8B2L|1|A3|U|2463

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B2L|1|A3|G|2454
8B2L|1|A3|G|2455
8B2L|1|A3|G|2457
8B2L|1|A3|U|2458
8B2L|1|A3|A|2459
8B2L|1|A3|G|2460
8B2L|1|A3|U|2461
8B2L|1|A3|A|2462
8B2L|1|A3|U|2463
8B2L|1|A3|A|2464
8B2L|1|A3|A|2465
*
8B2L|1|A3|U|2498
8B2L|1|A3|A|2499
8B2L|1|A3|C|2500

Current chains

Chain A3

25S rRNA

Nearby chains

Chain W2

Transfer RNA; tRNA