IL_8B2L_120

3D structure

PDB id

8B2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UGGGAG*CGAAAGUGAAAUACCA

Length

22 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B2L|1|A3|U|2467
8B2L|1|A3|G|2468
8B2L|1|A3|G|2469
8B2L|1|A3|G|2470
8B2L|1|A3|A|2471
8B2L|1|A3|G|2472
*
8B2L|1|A3|C|2481
8B2L|1|A3|G|2482
8B2L|1|A3|A|2483
8B2L|1|A3|A|2484
8B2L|1|A3|A|2485
8B2L|1|A3|G|2486
8B2L|1|A3|U|2487
8B2L|1|A3|G|2488
8B2L|1|A3|A|2489
8B2L|1|A3|A|2490
8B2L|1|A3|A|2491
8B2L|1|A3|U|2492
8B2L|1|A3|A|2493
8B2L|1|A3|C|2494
8B2L|1|A3|C|2495
8B2L|1|A3|A|2496

Current chains

Chain A3

25S rRNA

Nearby chains

Chain I1

40S ribosomal protein S25

Chain W2

Transfer RNA; tRNA