IL_8B2L_154
3D structure
- PDB id
- 8B2L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CCGCAGUAG*CCAAGG
- Length
- 15 nucleotides
- Bulged bases
- 8B2L|1|A3|C|3178, 8B2L|1|A3|A|3184
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8B2L|1|A3|C|3177
8B2L|1|A3|C|3178
8B2L|1|A3|G|3179
8B2L|1|A3|C|3180
8B2L|1|A3|A|3181
8B2L|1|A3|G|3182
8B2L|1|A3|U|3183
8B2L|1|A3|A|3184
8B2L|1|A3|G|3185
*
8B2L|1|A3|C|3199
8B2L|1|A3|C|3200
8B2L|1|A3|A|3201
8B2L|1|A3|A|3202
8B2L|1|A3|G|3203
8B2L|1|A3|G|3204
Current chains
- Chain A3
- 25S rRNA
Nearby chains
- Chain E3
- 60S ribosomal protein L14-1
- Chain I3
- 60S ribosomal protein L18a
- Chain S3
- eL33 (60S ribosomal protein L35a)
- Chain b3
- eL6 (60S ribosomal protein L6)
- Chain d3
- uL13 (60S ribosomal protein L13a)
- Chain u3
- uL6 (60S ribosomal protein L9)
Coloring options: