IL_8B2L_184
3D structure
- PDB id
- 8B2L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UGUAAG*CUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8B2L_184 not in the Motif Atlas
- Homologous match to IL_4V88_389
- Geometric discrepancy: 0.1408
- The information below is about IL_4V88_389
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61299.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
8B2L|1|h1|U|58
8B2L|1|h1|G|59
8B2L|1|h1|U|60
8B2L|1|h1|A|61
8B2L|1|h1|A|62
8B2L|1|h1|G|63
*
8B2L|1|h1|C|88
8B2L|1|h1|U|89
8B2L|1|h1|G|90
Current chains
- Chain h1
- 18S rRNA
Nearby chains
- Chain A1
- 40S ribosomal protein S4
- Chain H1
- 40S ribosomal protein S24
- Chain k1
- 40S ribosomal protein S6
Coloring options: