IL_8B2L_246

3D structure

PDB id

8B2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GU(PSU)GG*CGA(A2M)C

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B2L|1|h1|G|1291
8B2L|1|h1|U|1292
8B2L|1|h1|PSU|1293
8B2L|1|h1|G|1294
8B2L|1|h1|G|1295
*
8B2L|1|h1|C|1326
8B2L|1|h1|G|1327
8B2L|1|h1|A|1328
8B2L|1|h1|A2M|1329
8B2L|1|h1|C|1330

Current chains

Chain h1

18S rRNA

Nearby chains

Chain D1

40S ribosomal protein S17-like

Chain Z1

40S ribosomal protein SA

Chain a1

40S ribosomal protein S3-2-like

Chain c1

40S ribosomal protein S2-3-like