IL_8B2L_314
3D structure
- PDB id
- 8B2L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- A(PSU)UCAACGA*UUUGAAAUU
- Length
- 18 nucleotides
- Bulged bases
- 8B2L|1|h1|U|1528
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8B2L|1|h1|A|1484
8B2L|1|h1|PSU|1485
8B2L|1|h1|U|1486
8B2L|1|h1|C|1487
8B2L|1|h1|A|1488
8B2L|1|h1|A|1489
8B2L|1|h1|C|1490
8B2L|1|h1|G|1491
8B2L|1|h1|A|1492
*
8B2L|1|h1|U|1526
8B2L|1|h1|U|1527
8B2L|1|h1|U|1528
8B2L|1|h1|G|1529
8B2L|1|h1|A|1530
8B2L|1|h1|A|1531
8B2L|1|h1|A|1532
8B2L|1|h1|U|1533
8B2L|1|h1|U|1534
Current chains
- Chain h1
- 18S rRNA
Nearby chains
- Chain E1
- 40S ribosomal protein S19-3
- Chain I1
- 40S ribosomal protein S25
- Chain R1
- 40S ribosomal protein S20-2
- Chain V1
- 40S ribosomal protein S29
- Chain a1
- 40S ribosomal protein S3-2-like
- Chain d1
- 40S ribosomal protein S5-like
- Chain f1
- 40S ribosomal protein S16
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