IL_8B5L_164

3D structure

PDB id

8B5L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

8B5L|1|5|G|4780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B5L|1|5|U|4742
8B5L|1|5|C|4743
8B5L|1|5|G|4744
8B5L|1|5|U|4745
8B5L|1|5|A|4746
8B5L|1|5|C|4747
8B5L|1|5|G|4748
*
8B5L|1|5|U|4778
8B5L|1|5|U|4779
8B5L|1|5|G|4780
8B5L|1|5|A|4781
8B5L|1|5|A|4782
8B5L|1|5|A|4783

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain W

Ribosomal protein L24

Chain d

60S ribosomal protein L31