IL_8B6C_092
3D structure
- PDB id
- 8B6C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.79 Å
Loop
- Sequence
- CGAUC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8B6C_092 not in the Motif Atlas
- Geometric match to IL_7RQB_075
- Geometric discrepancy: 0.1782
- The information below is about IL_7RQB_075
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_56467.8
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
8B6C|1|5|C|2432
8B6C|1|5|G|2433
8B6C|1|5|A|2434
8B6C|1|5|U|2435
8B6C|1|5|C|2436
*
8B6C|1|5|G|2595
8B6C|1|5|G|2596
8B6C|1|5|G|2597
8B6C|1|5|A|2598
8B6C|1|5|G|2599
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain A
- Ribosomal protein L8
- Chain Z
- 60S ribosomal protein L27
- Chain g
- 60S ribosomal protein L34
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