IL_8B6C_130
3D structure
- PDB id
- 8B6C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.79 Å
Loop
- Sequence
- GACC*GC
- Length
- 6 nucleotides
- Bulged bases
- 8B6C|1|5|C|4095
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8B6C_130 not in the Motif Atlas
- Geometric match to IL_5J7L_032
- Geometric discrepancy: 0.2777
- The information below is about IL_5J7L_032
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_26793.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
8B6C|1|5|G|4093
8B6C|1|5|A|4094
8B6C|1|5|C|4095
8B6C|1|5|C|4096
*
8B6C|1|5|G|4110
8B6C|1|5|C|4111
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain L
- 60S ribosomal protein L13
- Chain Q
- eL18
- Chain a
- 60S ribosomal protein L27a
- Chain o
- 60S ribosomal protein L36a-like
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