IL_8B7Y_027
3D structure
- PDB id
- 8B7Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 8B7Y|1|C|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8B7Y_027 not in the Motif Atlas
- Homologous match to IL_4LFB_022
- Geometric discrepancy: 0.1086
- The information below is about IL_4LFB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20847.1
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
8B7Y|1|C|C|569
8B7Y|1|C|G|570
8B7Y|1|C|U|571
8B7Y|1|C|A|572
8B7Y|1|C|A|573
8B7Y|1|C|A|574
8B7Y|1|C|G|575
*
8B7Y|1|C|C|880
8B7Y|1|C|G|881
Current chains
- Chain C
- 16S ribosomal RNA
Nearby chains
- Chain P
- 30S ribosomal protein S8
- Chain q
- 30S ribosomal protein S12
- Chain v
- 30S ribosomal protein S17
Coloring options: