IL_8B7Y_149

3D structure

PDB id

8B7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

8B7Y|1|I|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8B7Y_149 not in the Motif Atlas

Homologous match to IL_7RQB_087

Geometric discrepancy: 0.3465

The information below is about IL_7RQB_087

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B7Y|1|I|C|2129
8B7Y|1|I|U|2130
8B7Y|1|I|U|2131
8B7Y|1|I|U|2132
8B7Y|1|I|G|2133
8B7Y|1|I|A|2134
8B7Y|1|I|A|2135
8B7Y|1|I|G|2136
*
8B7Y|1|I|U|2155
8B7Y|1|I|G|2156
8B7Y|1|I|G|2157
8B7Y|1|I|A|2158
8B7Y|1|I|G|2159

Current chains

Chain I

23S ribosomal RNA

Nearby chains