IL_8BF7_099
3D structure
- PDB id
- 8BF7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- UGUUC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 8BF7|1|0|U|2689, 8BF7|1|0|U|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BF7_099 not in the Motif Atlas
- Homologous match to IL_4WF9_102
- Geometric discrepancy: 0.1309
- The information below is about IL_4WF9_102
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
8BF7|1|0|U|2687
8BF7|1|0|G|2688
8BF7|1|0|U|2689
8BF7|1|0|U|2690
8BF7|1|0|C|2691
*
8BF7|1|0|G|2718
8BF7|1|0|G|2719
8BF7|1|0|U|2720
8BF7|1|0|A|2721
8BF7|1|0|G|2722
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L17
- Chain M
- 50S ribosomal protein L19
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