IL_8BGE_051

3D structure

PDB id

8BGE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.11 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

8BGE|1|0|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BGE_051 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.1005

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

8BGE|1|0|C|1437
8BGE|1|0|U|1438
8BGE|1|0|A|1439
8BGE|1|0|U|1440
*
8BGE|1|0|A|1551
8BGE|1|0|A|1552
8BGE|1|0|A|1553
8BGE|1|0|U|1554
8BGE|1|0|G|1555

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains