IL_8BGH_035
3D structure
- PDB id
- 8BGH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- CCA*UG
- Length
- 5 nucleotides
- Bulged bases
- 8BGH|1|0|C|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BGH_035 not in the Motif Atlas
- Homologous match to IL_7RQB_035
- Geometric discrepancy: 0.1499
- The information below is about IL_7RQB_035
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.12
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 40
Unit IDs
8BGH|1|0|C|994
8BGH|1|0|C|995
8BGH|1|0|A|996
*
8BGH|1|0|U|1159
8BGH|1|0|G|1160
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain G
- 50S ribosomal protein L13
- Chain N
- 50S ribosomal protein L20
- Chain O
- 50S ribosomal protein L21
- Chain W
- 50S ribosomal protein L30
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