IL_8BGH_181
3D structure
- PDB id
- 8BGH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- CUU*GGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BGH_181 not in the Motif Atlas
- Geometric match to IL_3SZX_003
- Geometric discrepancy: 0.1422
- The information below is about IL_3SZX_003
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
8BGH|1|2|C|1443
8BGH|1|2|U|1444
8BGH|1|2|U|1445
*
8BGH|1|2|G|1457
8BGH|1|2|G|1458
8BGH|1|2|G|1459
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain M
- 50S ribosomal protein L19
- Chain x
- 30S ribosomal protein S20
Coloring options: